On this page the results of each intermediate processing step can be downloaded. In order to download information about individual miRNAs or pathways please visit the correponding pages,
where all results can be downloaded in *.csv or *.xlsx.
GeneTrail2 enrichment results
These archives contains a directory for each miRNA that holds the enrichment results for the individual databases.
Info: Genes that are targets of the respective miRNA
Regulation_direction: Boolean indicating if category is enriched or depleted
Pathway x miRNA p-value matrix
These archives contain a pathway x miRNA matrix for each database and confidence level.
Each matrix is a *.csv file that contains the FDR-adjusted p-value for each (miRNA, pathway) pair.
Rows represent miRNAs and columns individual pathways. These matrices are computed based on the GeneTrail2 enrichment results.
On this page the results of each intermediate processing step can be downloaded. In order to download information about individual miRNAs or pathways please visit the correponding pages,
where all results can be downloaded in *.csv or *.xlsx.
GeneTrail2 enrichment results
These archives contains a directory for each miRNA that holds the enrichment results for the individual databases.
Info: Genes that are targets of the respective miRNA
Regulation_direction: Boolean indicating if category is enriched or depleted
Pathway x miRNA p-value matrix
These archives contain a pathway x miRNA matrix for each database and confidence level.
Each matrix is a *.csv file that contains the FDR-adjusted p-value for each (miRNA, pathway) pair.
Rows represent miRNAs and columns individual pathways. These matrices are computed based on the GeneTrail2 enrichment results.
Significantly regulated target pathways in Gene Matrix transposed (GMT) format
In the GMT format every line represents a set of miRNAs that belong to a certain biological function or signaling pathway.
The first column corresponds to the name of the pathway, the second column contains the miRPathDB URL to the respective molecular signature.
The following columns represent the miRNAs whose target genes are significantly enriched for this pathway.
Each miRNA occupies exactly one column.